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  • Negative cofitness for GFF1489 from Variovorax sp. SCN45

    Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like
    SEED: Outer membrane component of tripartite multidrug resistance system

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) -0.57
    2 GFF432 Probable transcription regulator protein of MDR efflux pump cluster -0.55
    3 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.54
    4 GFF421 hypothetical protein -0.53
    5 GFF6608 hypothetical protein -0.52
    6 GFF5009 hypothetical protein -0.51
    7 GFF4857 benzoate MFS transporter BenK -0.51
    8 GFF5356 Aldose 1-epimerase -0.51
    9 GFF1304 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) -0.51
    10 GFF1614 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) -0.51
    11 GFF4953 Beta-galactosidase (EC 3.2.1.23) -0.50
    12 GFF4647 no description -0.50
    13 GFF3029 T6SS component TssM (IcmF/VasK) -0.50
    14 GFF5872 Inner membrane protein YbhQ -0.50
    15 GFF4057 Copper/silver efflux RND transporter, membrane fusion protein CusB -0.49
    16 GFF1341 ABC transporter, ATP-binding protein 2 RSc1754 -0.49
    17 GFF1207 no description -0.49
    18 GFF2708 no description -0.48
    19 GFF7348 Oxidoreductase, aldo/keto reductase family -0.48
    20 GFF5575 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases -0.48

    Or look for positive cofitness