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  • Negative cofitness for GFF1466 from Sphingobium sp. HT1-2

    RNA polymerase sigma-54 factor RpoN
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5242 Quinone oxidoreductase (EC 1.6.5.5) -0.68
    2 GFF4892 protein tyrosine/serine phosphatase -0.64
    3 GFF2199 hypothetical protein -0.62
    4 GFF2026 Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site -0.62
    5 GFF4988 Prolyl oligopeptidase family protein -0.61
    6 GFF2439 hypothetical protein -0.60
    7 GFF1749 Acyl-CoA dehydrogenase 2 [fadN-fadA-fadE operon] (EC 1.3.8.7) -0.60
    8 GFF2568 hypothetical protein -0.58
    9 GFF1414 Low-affinity inorganic phosphate transporter -0.58
    10 GFF712 hypothetical protein -0.58
    11 GFF1501 EpsH -0.57
    12 GFF5006 Metallo-beta-lactamase family protein, RNA-specific -0.57
    13 GFF5114 hypothetical protein -0.55
    14 GFF4749 hypothetical protein -0.55
    15 GFF4756 Mobile element protein -0.54
    16 GFF4608 hypothetical protein -0.54
    17 GFF252 hypothetical protein -0.54
    18 GFF3768 O-antigen acetylase -0.54
    19 GFF1843 FIG00883918: hypothetical protein -0.54
    20 GFF2608 hypothetical protein -0.54

    Or look for positive cofitness