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  • Negative cofitness for GFF1448 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2686 Large protein containing transglutaminase-like domain -0.58
    2 GFF1771 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.57
    3 GFF4423 Conjugative transfer protein TrbI -0.57
    4 GFF1220 Transcriptional regulator, MerR family -0.56
    5 GFF2106 hypothetical protein -0.56
    6 GFF5519 Transcriptional regulator -0.55
    7 GFF5994 Chlorogenate esterase -0.52
    8 GFF1857 FIG00553873: hypothetical protein -0.52
    9 GFF6978 no description -0.51
    10 GFF2078 hypothetical protein -0.51
    11 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) -0.51
    12 GFF891 Gfa-like protein -0.50
    13 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component -0.50
    14 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) -0.49
    15 GFF1956 Ser/Thr protein phosphatase family protein -0.49
    16 GFF3710 Lactoylglutathione lyase and related lyases -0.49
    17 GFF842 hypothetical protein -0.48
    18 GFF6828 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) -0.48
    19 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) -0.48
    20 GFF615 beta-glucosidase (EC 3.2.1.21) -0.48

    Or look for positive cofitness