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  • Negative cofitness for PS417_00725 from Pseudomonas simiae WCS417

    RND transporter
    SEED: Outer membrane component of tripartite multidrug resistance system

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_20880 GntR family transcriptional regulator -0.24
    2 PS417_04550 hypothetical protein -0.20
    3 PS417_21400 TetR family transcriptional regulator -0.19
    4 PS417_21735 ABC transporter for L-Arginine, permease component 2 (from data) -0.19
    5 PS417_23890 ATPase -0.19
    6 PS417_04080 peptide ABC transporter substrate-binding protein -0.19
    7 PS417_19995 Long-chain fatty acid transport protein -0.18
    8 PS417_04555 LuxR family transcriptional regulator -0.17
    9 PS417_04070 porin -0.17
    10 PS417_06955 membrane protein -0.17
    11 PS417_23520 cysteine biosynthesis protein CysZ -0.16
    12 PS417_05525 Fis family transcriptional regulator -0.16
    13 PS417_21755 hypothetical protein -0.16
    14 PS417_07130 RNA polymerase sigma-H factor AlgU -0.16
    15 PS417_09190 cysteine protease -0.15
    16 PS417_21740 ABC transporter for L-Arginine, permease component 1 (from data) -0.15
    17 PS417_04485 hypothetical protein -0.15
    18 PS417_16990 acyl-CoA dehydrogenase -0.15
    19 PS417_25285 thioredoxin -0.14
    20 PS417_03375 hypothetical protein -0.14

    Or look for positive cofitness