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  • Negative cofitness for GFF1426 from Variovorax sp. SCN45

    Phenylacetate ABC transporter, ATP-binding protein 2
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4494 hypothetical protein -0.54
    2 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.54
    3 GFF740 Uncharacterized protein YdcJ -0.52
    4 GFF6937 Membrane protein -0.50
    5 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO -0.50
    6 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain -0.50
    7 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) -0.49
    8 GFF261 no description -0.49
    9 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) -0.49
    10 GFF5095 hypothetical protein -0.49
    11 GFF3445 Cupin 2, conserved barrel -0.48
    12 GFF5685 Gluconate 5-dehydrogenase (EC 1.1.1.69) -0.47
    13 GFF6613 no description -0.47
    14 GFF2691 no description -0.47
    15 GFF1668 BUG/TctC family periplasmic protein -0.47
    16 GFF1856 FIG00636408: hypothetical protein -0.46
    17 GFF1455 DNA polymerase II (EC 2.7.7.7) -0.46
    18 GFF6415 ATP-dependent DNA helicase RecQ -0.46
    19 GFF1559 Mg(2+)-transport-ATPase-associated protein MgtC -0.46
    20 GFF4019 Arsenical-resistance protein ACR3 -0.45

    Or look for positive cofitness