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  • Negative cofitness for PS417_07240 from Pseudomonas simiae WCS417

    Transcriptional regulator of deoxyribose catabolism (from data)
    Original annotation: GntR family transcriptional regulator
    SEED: Predicted regulator PutR for proline utilization, GntR family

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_03560 GTP-binding protein -0.26
    2 PS417_10905 hypothetical protein -0.23
    3 PS417_26760 oxidase -0.22
    4 PS417_10900 ABC transporter substrate-binding protein -0.22
    5 PS417_09845 hypothetical protein -0.18
    6 PS417_19160 hypothetical protein -0.18
    7 PS417_12845 NAD(P)H dehydrogenase -0.18
    8 PS417_24600 hydrogenase -0.18
    9 PS417_23930 histidine kinase -0.18
    10 PS417_02105 acyl carrier protein -0.18
    11 PS417_03215 8-oxoguanine deaminase -0.17
    12 PS417_03485 type III secretion protein -0.17
    13 PS417_03260 5S ribosomal RNA -0.17
    14 PS417_23620 epimerase -0.16
    15 PS417_10910 FAD-dependent oxidoreductase -0.16
    16 PS417_12090 hypothetical protein -0.16
    17 PS417_03145 acetyl-CoA acetyltransferase -0.16
    18 PS417_13625 cytochrome B561 -0.16
    19 PS417_09620 lipopolysaccharide biosynthesis protein -0.16
    20 PS417_15165 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase -0.16

    Or look for positive cofitness