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  • Negative cofitness for GFF1424 from Variovorax sp. SCN45

    Phenylacetate ABC transporter, permease protein 2
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3502 hypothetical protein -0.54
    2 GFF3235 no description -0.54
    3 GFF6143 2-aminoethylphosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) -0.54
    4 GFF1375 Transcriptional regulator, LysR family -0.53
    5 GFF3819 hypothetical protein -0.51
    6 GFF4646 Magnesium and cobalt transport protein CorA -0.50
    7 GFF5922 T6SS forkhead associated domain protein ImpI/VasC -0.50
    8 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.50
    9 GFF5118 gluconolactonase family protein -0.50
    10 GFF4661 no description -0.50
    11 GFF6867 no description -0.49
    12 GFF4255 no description -0.49
    13 GFF6757 no description -0.49
    14 GFF1944 hypothetical protein -0.49
    15 GFF2962 RND efflux system, membrane fusion protein -0.49
    16 GFF6378 Nicotinamidase (EC 3.5.1.19) -0.49
    17 GFF1831 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3 -0.48
    18 GFF4918 hypothetical protein -0.47
    19 GFF1455 DNA polymerase II (EC 2.7.7.7) -0.47
    20 GFF3662 hypothetical protein -0.47

    Or look for positive cofitness