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  • Negative cofitness for PS417_07130 from Pseudomonas simiae WCS417

    RNA polymerase sigma-H factor AlgU
    SEED: Sigma factor RpoE negative regulatory protein RseB precursor
    KEGG: sigma-E factor negative regulatory protein RseB

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_03705 2-alkenal reductase -0.28
    2 PS417_18355 DNA-binding protein -0.27
    3 PS417_09825 hypothetical protein -0.24
    4 PS417_24600 hydrogenase -0.24
    5 PS417_19055 ArsR family transcriptional regulator -0.24
    6 PS417_09595 membrane protein -0.21
    7 PS417_26775 thiazole synthase -0.21
    8 PS417_08930 hypothetical protein -0.21
    9 PS417_20175 LysR family transcriptional regulator -0.21
    10 PS417_19775 chemotaxis protein CheY -0.21
    11 PS417_22390 lactate dehydrogenase -0.21
    12 PS417_23155 pilus assembly protein PilW -0.21
    13 PS417_13455 alkaline proteinase inhibitor -0.21
    14 PS417_09585 acetyltransferase -0.20
    15 PS417_21105 aminodeoxychorismate synthase -0.20
    16 PS417_26525 DEAD/DEAH box helicase -0.20
    17 PS417_11835 MFS transporter -0.20
    18 PS417_17195 pyruvate dehydrogenase -0.19
    19 PS417_02015 membrane protein -0.19
    20 PS417_12055 xylitol ABC transporter, substrate-binding component (from data) -0.19

    Or look for positive cofitness