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  • Negative cofitness for PS417_07120 from Pseudomonas simiae WCS417

    RNA polymerase sigma-H factor
    SEED: RNA polymerase sigma-H factor AlgT
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_19265 membrane protein -0.47
    2 PS417_06515 beta-agarase -0.46
    3 PS417_17200 hypothetical protein -0.41
    4 PS417_03270 paraquat-inducible protein A -0.36
    5 PS417_14950 structural protein MipA -0.33
    6 PS417_13605 short-chain dehydrogenase -0.33
    7 PS417_04270 ribonuclease G -0.33
    8 PS417_26650 histidine kinase -0.33
    9 PS417_07510 aspartyl beta-hydroxylase -0.32
    10 PS417_14955 hypothetical protein -0.32
    11 PS417_12180 ABC transporter substrate-binding protein -0.32
    12 PS417_02270 carbamoyltransferase -0.31
    13 PS417_03275 mammalian cell entry protein -0.31
    14 PS417_01200 phosphoesterase -0.30
    15 PS417_25015 fimbria A protein -0.30
    16 PS417_26645 chemotaxis protein -0.29
    17 PS417_04365 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase -0.29
    18 PS417_10855 chemotaxis protein CheY -0.29
    19 PS417_06160 beta-(1-3)-glucosyl transferase -0.29
    20 PS417_27425 exopolyphosphatase -0.28

    Or look for positive cofitness