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  • Negative cofitness for GFF1400 from Variovorax sp. SCN45

    putative 2-pyrone-4,6-dicarboxylic acid hydrolase
    SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6732 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) -0.55
    2 GFF6270 Uncharacterized MFS-type transporter -0.55
    3 GFF626 CzcABC family efflux RND transporter, transmembrane protein -0.53
    4 GFF711 KEGG: ribose transport system permease protein -0.51
    5 GFF5743 Flagellar motor switch protein FliM -0.50
    6 GFF1744 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.50
    7 GFF7327 FIG074102: hypothetical protein -0.50
    8 GFF3025 Proton/sodium-glutamate symport protein -0.49
    9 GFF2948 salicylate esterase -0.48
    10 GFF193 Two-component sensor PilS -0.48
    11 GFF7193 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) -0.47
    12 GFF5585 Transcriptional regulator, MarR family -0.47
    13 GFF5710 no description -0.47
    14 GFF4914 Luciferase-like monooxygenase YhbW -0.46
    15 GFF2635 hypothetical protein -0.46
    16 GFF2316 FIG015547: peptidase, M16 family -0.46
    17 GFF3648 putative c'cytochrome -0.46
    18 GFF5174 Uncharacterized conserved protein -0.45
    19 GFF4556 hypothetical protein -0.45
    20 GFF1154 Putative transmembrane protein -0.45

    Or look for positive cofitness