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  • Negative cofitness for PS417_07080 from Pseudomonas simiae WCS417

    porin
    SEED: Tricarboxylate porin OpdH

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_05090 ferric citrate outer membrane transporter (fecA) (from data) -0.55
    2 PS417_13375 LysR family transcriptional regulator -0.29
    3 PS417_22670 AraC family transcriptional regulator -0.26
    4 PS417_05100 RNA polymerase sigma factor -0.23
    5 PS417_14200 hypothetical protein -0.19
    6 PS417_26820 peptidase M16 -0.19
    7 PS417_09325 peptidase S41 -0.15
    8 PS417_17635 hemolysin secretion protein D -0.14
    9 PS417_02725 hypothetical protein -0.14
    10 PS417_21725 amino acid transporter -0.14
    11 PS417_03160 metal ABC transporter ATPase -0.13
    12 PS417_15585 DNA repair nucleotidyltransferase -0.13
    13 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) -0.13
    14 PS417_07160 glycine cleavage system protein R -0.13
    15 PS417_25900 LysR family transcriptional regulator -0.13
    16 PS417_13050 N-acetylglucosamine-6-sulfatase -0.12
    17 PS417_10655 LuxR family transcriptional regulator -0.12
    18 PS417_21730 peptidase M14 -0.12
    19 PS417_10050 hypothetical protein -0.12
    20 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase -0.12

    Or look for positive cofitness