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  • Negative cofitness for PS417_07065 from Pseudomonas simiae WCS417

    tripartite tricarboxylate transporter TctA
    SEED: Tricarboxylate transport membrane protein TctA
    KEGG: putative tricarboxylic transport membrane protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_05090 ferric citrate outer membrane transporter (fecA) (from data) -0.60
    2 PS417_13375 LysR family transcriptional regulator -0.36
    3 PS417_22670 AraC family transcriptional regulator -0.29
    4 PS417_26820 peptidase M16 -0.27
    5 PS417_05100 RNA polymerase sigma factor -0.24
    6 PS417_14200 hypothetical protein -0.22
    7 PS417_09325 peptidase S41 -0.17
    8 PS417_02725 hypothetical protein -0.17
    9 PS417_03160 metal ABC transporter ATPase -0.17
    10 PS417_21285 hypothetical protein -0.15
    11 PS417_07160 glycine cleavage system protein R -0.15
    12 PS417_00245 oligopeptidase A -0.14
    13 PS417_20985 porin -0.14
    14 PS417_24585 AMP nucleosidase -0.14
    15 PS417_26815 peptidase M16 -0.13
    16 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase -0.13
    17 PS417_12155 transporter -0.12
    18 PS417_01780 proline iminopeptidase -0.12
    19 PS417_27835 endoribonuclease -0.11
    20 PS417_08525 phospho-2-dehydro-3-deoxyheptonate aldolase -0.11

    Or look for positive cofitness