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  • Negative cofitness for GFF1390 from Variovorax sp. SCN45

    ortholog of Bordetella pertussis (BX470248) BP2750
    SEED: ortholog of Bordetella pertussis (BX470248) BP2750
    KEGG: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF312 FIG021862: membrane protein, exporter -0.64
    2 GFF4393 Uncharacterized ABC1 family protein XCC_1720 -0.61
    3 GFF2649 putative autotransporter protein -0.60
    4 GFF6172 Na(+) H(+) antiporter subunit C -0.59
    5 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) -0.59
    6 GFF6049 Acyl-CoA dehydrogenase family protein -0.58
    7 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) -0.56
    8 GFF6337 Ser/Thr protein phosphatase family protein -0.56
    9 GFF2975 SAM-dependent methyltransferase -0.56
    10 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) -0.55
    11 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake -0.55
    12 GFF4649 Iron-chelator utilization protein -0.54
    13 GFF3912 Ferrous iron transport permease EfeU -0.54
    14 GFF375 hypothetical protein -0.53
    15 GFF803 MutT/Nudix family protein -0.53
    16 GFF4801 DedA protein -0.52
    17 GFF4426 Homolog of eukaryotic DNA ligase III -0.52
    18 GFF5732 Methyl-accepting chemotaxis sensor/transducer protein -0.51
    19 GFF4396 Mobile element protein -0.51
    20 GFF2738 hypothetical protein -0.51

    Or look for positive cofitness