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  • Negative cofitness for GFF1379 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Nitrate/nitrite transporter

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2484 Urease beta subunit (EC 3.5.1.5) -0.52
    2 GFF635 Urea ABC transporter, permease protein UrtB -0.51
    3 GFF1570 Muconate cycloisomerase (EC 5.5.1.1) -0.50
    4 GFF2218 FIG00455441: hypothetical protein -0.49
    5 GFF3994 hypothetical protein -0.49
    6 GFF6307 hypothetical protein -0.49
    7 GFF5218 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) -0.48
    8 GFF3879 Uncharacterized protein, similar to the N-terminal domain of Lon protease -0.47
    9 GFF3965 Alcohol dehydrogenase, zinc-binding -0.46
    10 GFF1620 Large exoproteins involved in heme utilization or adhesion -0.46
    11 GFF39 Transcriptional regulator, LysR family -0.46
    12 GFF7366 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.46
    13 GFF2687 Protein containing domains DUF404, DUF407, DUF403 -0.46
    14 GFF4973 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) -0.46
    15 GFF6552 Uncharacterized lipoprotein Bmul_4930 -0.45
    16 GFF6112 Oligopeptide ABC transporter, ATP-binding protein OppD (TC 3.A.1.5.1) -0.45
    17 GFF5119 Ammonium transporter -0.45
    18 GFF6894 FIG00454405: hypothetical protein -0.44
    19 GFF6416 hypothetical protein -0.44
    20 GFF3136 no description -0.44

    Or look for positive cofitness