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  • Negative cofitness for GFF1375 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Glycine cleavage system transcriptional activator
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF66 hypothetical protein -0.58
    2 GFF1793 hypothetical protein -0.56
    3 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain -0.54
    4 GFF628 hypothetical protein -0.54
    5 GFF1424 Phenylacetate ABC transporter, permease protein 2 -0.53
    6 GFF2902 ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) -0.52
    7 GFF5940 T6SS associated component TagJ (ImpE) -0.52
    8 GFF7415 no description -0.52
    9 GFF504 SAM-dependent methyltransferases -0.51
    10 GFF2566 AsmA -0.51
    11 GFF318 Uncharacterized protein YjgR -0.51
    12 GFF2451 Cytosine/purine/uracil/thiamine/allantoin permease family protein -0.51
    13 GFF4003 FIGfam005179 -0.51
    14 GFF2410 Intracellular protease -0.50
    15 GFF5140 no description -0.50
    16 GFF6109 FIG00986406: hypothetical protein -0.49
    17 GFF7051 hypothetical protein -0.49
    18 GFF2416 Transcriptional regulator YbhD, LysR family -0.49
    19 GFF4151 RidA/YER057c/UK114 superfamily, group 1 -0.49
    20 GFF1251 FMNH2-dependent alkanesulfonate monooxygenase (EC 1.14.14.5) -0.49

    Or look for positive cofitness