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  • Negative cofitness for GFF1366 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Putative drug efflux protein
    KEGG: MFS transporter, DHA1 family, arabinose polymer transporter

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) -0.66
    2 GFF1317 no description -0.64
    3 GFF3893 hypothetical protein -0.64
    4 GFF494 RND efflux system, membrane fusion protein -0.58
    5 GFF2884 Pyruvate:Oxaloacetate transcarboxylase domain protein -0.57
    6 GFF4998 L-carnitine dehydratase/bile acid-inducible protein F -0.56
    7 GFF2778 Fosmidomycin resistance protein -0.55
    8 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) -0.54
    9 GFF3849 Iron-sulfur cluster-binding protein, Rieske family -0.54
    10 GFF3920 FIG00467295: hypothetical protein -0.54
    11 GFF1177 Serine protease -0.53
    12 GFF1148 hypothetical protein -0.53
    13 GFF7132 Xylose isomerase-like TIM-barrel protein KPN_00539 -0.52
    14 GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) -0.51
    15 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) -0.51
    16 GFF4433 1,6-anhydro-N-acetylmuramyl-L-alanine amidase -0.51
    17 GFF3931 Protein sirB1 -0.51
    18 GFF3748 KEGG: dihydrodipicolinate synthase -0.50
    19 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.50
    20 GFF5860 no description -0.50

    Or look for positive cofitness