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  • Negative cofitness for PS417_06930 from Pseudomonas simiae WCS417

    carnitine dehydratase
    SEED: L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_26715 peptidase P60 -0.22
    2 PS417_01380 nucleotide cyclase -0.20
    3 PS417_07170 hypothetical protein -0.20
    4 PS417_26840 TetR family transcriptional regulator -0.20
    5 PS417_22320 amino acid APC transporter -0.19
    6 PS417_18690 aromatic amino acid aminotransferase -0.18
    7 PS417_04445 cupin -0.17
    8 PS417_22120 aldose epimerase -0.17
    9 PS417_00730 NADH:ubiquinone oxidoreductase subunit N -0.17
    10 PS417_12840 TetR family transcriptional regulator -0.17
    11 PS417_21380 GntR family transcriptional regulator -0.17
    12 PS417_23770 exodeoxyribonuclease V subunit alpha -0.17
    13 PS417_06645 RNA polymerase-associated protein RapA -0.16
    14 PS417_16645 XRE family transcriptional regulator -0.16
    15 PS417_06530 membrane protein -0.16
    16 PS417_13895 chemotaxis protein CheB -0.16
    17 PS417_24650 membrane protein -0.16
    18 PS417_20565 RNA polymerase subunit sigma-24 -0.16
    19 PS417_11340 prevent-host-death protein -0.16
    20 PS417_10275 histidine kinase -0.15

    Or look for positive cofitness