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  • Negative cofitness for PS417_06780 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator
    SEED: Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family
    KEGG: TetR/AcrR family transcriptional regulator, acrAB operon repressor

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06775 antibiotic transporter -0.56
    2 PS417_06770 multidrug transporter -0.54
    3 PS417_24780 peptidase C13 -0.52
    4 PS417_19940 membrane protein -0.46
    5 PS417_21095 membrane protein -0.39
    6 PS417_16910 multidrug resistance protein B -0.36
    7 PS417_16920 multidrug RND transporter -0.36
    8 PS417_22825 hypothetical protein -0.36
    9 PS417_21280 membrane protein -0.36
    10 PS417_12595 transcriptional regulator -0.36
    11 PS417_16915 hemolysin D -0.35
    12 PS417_02255 lipopolysaccharide kinase -0.35
    13 PS417_21100 alpha-L-glutamate ligase -0.35
    14 PS417_01495 amino acid ABC transporter -0.34
    15 PS417_12610 RNA polymerase sigma factor -0.34
    16 PS417_27605 hypothetical protein -0.34
    17 PS417_18365 hypothetical protein -0.33
    18 PS417_03275 mammalian cell entry protein -0.33
    19 PS417_26255 hypothetical protein -0.32
    20 PS417_18355 DNA-binding protein -0.32

    Or look for positive cofitness