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  • Negative cofitness for PS417_06720 from Pseudomonas simiae WCS417

    protocatechuate 3,4-dioxygenase
    SEED: Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
    KEGG: protocatechuate 3,4-dioxygenase, alpha subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_23155 pilus assembly protein PilW -0.21
    2 PS417_27505 transcriptional regulator -0.19
    3 PS417_03525 hypothetical protein -0.19
    4 PS417_22230 class I peptide chain release factor -0.19
    5 PS417_12105 ABC transporter permease -0.19
    6 PS417_03105 secretin -0.19
    7 PS417_17100 spore coat protein -0.17
    8 PS417_27475 membrane protein -0.17
    9 PS417_17050 transcriptional regulator -0.17
    10 PS417_10135 phage tail protein -0.17
    11 PS417_01760 imidazolonepropionase -0.17
    12 PS417_01180 ribosomal protein S6 modification protein -0.17
    13 PS417_20580 isocitrate dehydrogenase -0.17
    14 PS417_23790 sulfoxide reductase catalytic subunit YedY -0.17
    15 PS417_00180 tryptophan synthase subunit alpha -0.17
    16 PS417_03950 hypothetical protein -0.16
    17 PS417_09755 hypothetical protein -0.16
    18 PS417_21275 GntR family transcriptional regulator -0.16
    19 PS417_22020 pili assembly chaperone -0.16
    20 PS417_08330 terminase -0.16

    Or look for positive cofitness