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  • Negative cofitness for PS417_06715 from Pseudomonas simiae WCS417

    protocatechuate 3,4-dioxygenase
    SEED: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
    KEGG: protocatechuate 3,4-dioxygenase, beta subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_20645 membrane protein -0.23
    2 PS417_01725 sulfonate ABC transporter substrate-binding protein -0.21
    3 PS417_19075 ABC transporter ATP-binding protein -0.20
    4 PS417_20655 group 1 glycosyl transferase -0.20
    5 PS417_20665 hypothetical protein -0.20
    6 PS417_10555 major facilitator transporter -0.19
    7 PS417_16230 ABC transporter permease -0.18
    8 PS417_08180 glycosyl transferase -0.18
    9 PS417_07290 aldehyde dehydrogenase -0.18
    10 PS417_28205 transporter -0.18
    11 PS417_15610 GDP-mannose pyrophosphatase -0.18
    12 PS417_08160 hypothetical protein -0.17
    13 PS417_08580 histidine kinase -0.17
    14 PS417_20660 hypothetical protein -0.17
    15 PS417_08225 acetolactate synthase -0.17
    16 PS417_20620 glycosyl transferase family 2 -0.17
    17 PS417_11630 sodium:dicarboxylate symporter -0.17
    18 PS417_08220 epimerase -0.17
    19 PS417_19805 flagellar M-ring protein FliF -0.17
    20 PS417_11625 fumarate hydratase -0.17

    Or look for positive cofitness