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  • Negative cofitness for PS417_06705 from Pseudomonas simiae WCS417

    3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data)
    Original annotation: 3-oxoadipate:succinyl-CoA transferase
    SEED: 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6); Glutaconate CoA-transferase subunit B (EC 2.8.3.12)
    KEGG: glutaconate CoA-transferase, subunit B

    Computing cofitness values with 554 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_17270 D-alanyl-D-alanine endopeptidase -0.23
    2 PS417_01545 adenine glycosylase -0.21
    3 PS417_20715 cytochrome Cbb3 -0.21
    4 PS417_28265 pyridoxamine kinase -0.21
    5 PS417_07020 chemotaxis protein -0.20
    6 PS417_18310 hypothetical protein -0.19
    7 PS417_21220 acetyl-CoA acetyltransferase -0.19
    8 PS417_21670 6,7-dimethyl-8-ribityllumazine synthase -0.19
    9 PS417_12815 diguanylate cyclase -0.18
    10 PS417_01020 glutamine ABC transporter permease -0.18
    11 PS417_16160 ABC transporter substrate-binding protein -0.18
    12 PS417_25105 hypothetical protein -0.18
    13 PS417_07440 cyclic nucleotide-binding protein -0.17
    14 PS417_10720 chemotaxis protein CheY -0.17
    15 PS417_19625 histidine kinase -0.17
    16 PS417_12530 LysR family transcriptional regulator -0.17
    17 PS417_19635 lipid kinase -0.17
    18 PS417_13865 bestrophin -0.17
    19 PS417_20705 cbb3-type cytochrome c oxidase subunit II -0.17
    20 PS417_11995 RNA polymerase sigma factor -0.17

    Or look for positive cofitness