• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_06700 from Pseudomonas simiae WCS417

    3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) (from data)
    Original annotation: 3-oxoadipate:succinyl-CoA transferase
    SEED: 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6); Glutaconate CoA-transferase subunit A (EC 2.8.3.12)
    KEGG: glutaconate CoA-transferase, subunit A

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_04105 ABC transporter ATP-binding protein -0.27
    2 PS417_17285 hypothetical protein -0.20
    3 PS417_12915 DNA-binding protein -0.19
    4 PS417_14560 TonB-dependent receptor -0.19
    5 PS417_11820 histidine kinase -0.19
    6 PS417_23315 transcriptional regulator -0.18
    7 PS417_09225 C4-dicarboxylate ABC transporter -0.18
    8 PS417_06160 beta-(1-3)-glucosyl transferase -0.18
    9 PS417_17290 RND transporter -0.18
    10 PS417_21800 MFS transporter -0.18
    11 PS417_06100 SAM-dependent methyltransferase -0.18
    12 PS417_15250 DNA repair protein -0.17
    13 PS417_27465 cystathionine gamma-synthase -0.17
    14 PS417_27960 Hcp1 family type VI secretion system effector -0.17
    15 PS417_04305 aspartate ammonia-lyase -0.17
    16 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase -0.17
    17 PS417_20660 hypothetical protein -0.16
    18 PS417_09325 peptidase S41 -0.16
    19 PS417_17385 aldose epimerase -0.16
    20 PS417_06870 TonB-dependent receptor -0.16

    Or look for positive cofitness