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  • Negative cofitness for PS417_06645 from Pseudomonas simiae WCS417

    RNA polymerase-associated protein RapA
    SEED: RNA polymerase associated protein RapA (EC 3.6.1.-)
    KEGG: ATP-dependent helicase HepA

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_26875 histidine kinase -0.29
    2 PS417_20475 hypothetical protein -0.27
    3 PS417_19375 LysR family transcriptional regulator -0.25
    4 PS417_19775 chemotaxis protein CheY -0.24
    5 PS417_05960 chemotaxis protein -0.24
    6 PS417_28250 cell wall assembly protein -0.23
    7 PS417_18605 LysR family transcriptional regulator -0.23
    8 PS417_26340 betaine-aldehyde dehydrogenase -0.23
    9 PS417_05135 nucleoid-associated protein -0.22
    10 PS417_15690 ribonucleoside-triphosphate reductase -0.22
    11 PS417_12260 hypothetical protein -0.22
    12 PS417_22250 pseudouridine synthase -0.22
    13 PS417_26345 choline dehydrogenase -0.21
    14 PS417_04010 glycine/betaine ABC transporter ATP-binding protein -0.21
    15 PS417_02835 branched-chain amino acid ABC transporter substrate-binding protein -0.21
    16 PS417_19495 N-acyl-L-amino acid amidohydrolase -0.20
    17 PS417_04020 glycine/betaine ABC transporter substrate-binding protein -0.20
    18 PS417_13460 peptidase -0.20
    19 PS417_20175 LysR family transcriptional regulator -0.20
    20 PS417_19350 GTP cyclohydrolase -0.19

    Or look for positive cofitness