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  • Negative cofitness for GFF1301 from Variovorax sp. SCN45

    Peptide deformylase (EC 3.5.1.88)
    SEED: Peptide deformylase (EC 3.5.1.88)
    KEGG: peptide deformylase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5272 Various polyols ABC transporter, substrate-binding protein -0.55
    2 GFF3338 Threonine efflux protein -0.54
    3 GFF6592 hypothetical protein -0.53
    4 GFF2494 Threonine-synthase-like protein 4 -0.53
    5 GFF6989 Flagellar basal-body rod modification protein FlgD -0.51
    6 GFF3081 no description -0.51
    7 GFF3979 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-) -0.50
    8 GFF3542 hypothetical protein -0.49
    9 GFF5952 no description -0.48
    10 GFF2143 probable membrane protein YPO3302 -0.47
    11 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) -0.47
    12 GFF5141 no description -0.47
    13 GFF6579 Conjugative transfer protein TrbB -0.47
    14 GFF1655 no description -0.46
    15 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.46
    16 GFF3367 Septum site-determining protein MinC -0.45
    17 GFF925 hypothetical protein -0.45
    18 GFF1403 MATE efflux family protein -0.45
    19 GFF2117 KEGG: type IV fimbrial biogenesis protein FimT -0.45
    20 GFF4438 Sugar kinases, ribokinase family -0.44

    Or look for positive cofitness