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  • Negative cofitness for PS417_06605 from Pseudomonas simiae WCS417

    leucine/isoleucine/valine transporter permease subunit
    SEED: Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_21275 GntR family transcriptional regulator -0.50
    2 PS417_19545 peptide synthase -0.31
    3 PS417_11690 peptide synthase -0.28
    4 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) -0.27
    5 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) -0.26
    6 PS417_11695 peptide synthase -0.25
    7 PS417_24680 murein transglycosylase -0.25
    8 PS417_01180 ribosomal protein S6 modification protein -0.24
    9 PS417_12665 hypothetical protein -0.23
    10 PS417_17625 ornithine monooxygenase -0.22
    11 PS417_23730 LysR family transcriptional regulator -0.21
    12 PS417_25705 lipoate--protein ligase -0.19
    13 PS417_27210 AsnC family transcriptional regulator -0.19
    14 PS417_24265 ABC transporter ATP-binding protein -0.18
    15 PS417_22030 glutathione S-transferase -0.18
    16 PS417_18485 membrane protein -0.18
    17 PS417_27605 hypothetical protein -0.18
    18 PS417_02525 iron ABC transporter permease -0.18
    19 PS417_04790 mannose-1-phosphate guanylyltransferase -0.18
    20 PS417_08000 beta-hydroxylase -0.18

    Or look for positive cofitness