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  • Negative cofitness for GFF1281 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
    SEED: Glutamate transport membrane-spanning protein
    KEGG: polar amino acid transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) -0.55
    2 GFF1678 Transcriptional regulator, GntR family -0.54
    3 GFF2735 Transcriptional regulator, LysR family -0.52
    4 GFF2024 L-lysine permease -0.51
    5 GFF1455 DNA polymerase II (EC 2.7.7.7) -0.51
    6 GFF4994 Acyl-CoA-binding protein -0.50
    7 GFF5812 DNA-binding heavy metal response regulator -0.49
    8 GFF1713 no description -0.49
    9 GFF5981 COGs COG3558 -0.49
    10 GFF773 hypothetical protein -0.49
    11 GFF6613 no description -0.49
    12 GFF2596 Multidrug resistance transporter, Bcr/CflA family -0.48
    13 GFF5968 no description -0.48
    14 GFF6335 no description -0.48
    15 GFF7031 hypothetical protein -0.47
    16 GFF5688 Transcriptional regulator, LysR family -0.47
    17 GFF5244 General secretion pathway protein G -0.47
    18 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family -0.47
    19 GFF7107 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases -0.47
    20 GFF1640 Polyketide synthase modules and related proteins -0.46

    Or look for positive cofitness