• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_06420 from Pseudomonas simiae WCS417

    ATP-dependent DNA ligase
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    KEGG: DNA ligase (ATP)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_07705 phosphatase -0.21
    2 PS417_26170 formyltetrahydrofolate deformylase -0.21
    3 PS417_07165 dihydrodipicolinate synthase -0.21
    4 PS417_27390 ABC transporter permease -0.20
    5 PS417_25095 hypothetical protein -0.20
    6 PS417_07920 hypothetical protein -0.20
    7 PS417_14975 tRNA hydroxylase -0.19
    8 PS417_10615 hypothetical protein -0.19
    9 PS417_28035 transcriptional regulator PhoB -0.19
    10 PS417_15250 DNA repair protein -0.19
    11 PS417_11175 AraC family transcriptional regulator -0.19
    12 PS417_09330 NAD(P)H-quinone oxidoreductase -0.18
    13 PS417_10210 hypothetical protein -0.18
    14 PS417_04375 ABC transporter ATP-binding protein -0.18
    15 PS417_18265 AsnC family transcriptional regulator -0.18
    16 PS417_00195 hypothetical protein -0.17
    17 PS417_26190 sarcosine oxidase subunit beta -0.17
    18 PS417_04065 peptide ABC transporter substrate-binding protein -0.17
    19 PS417_26445 ArsR family transcriptional regulator -0.17
    20 PS417_18275 VacJ family lipoprotein -0.16

    Or look for positive cofitness