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  • Negative cofitness for GFF1264 from Variovorax sp. SCN45

    Transcriptional regulator, Xre family
    SEED: Predicted transcriptional regulators

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2049 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) -0.57
    2 GFF1792 Transcriptional regulator, IclR family -0.56
    3 GFF1372 Uncharacterized MFS-type transporter -0.53
    4 GFF6704 no description -0.52
    5 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) -0.51
    6 GFF6571 Conjugative transfer protein TrbI -0.51
    7 GFF5023 Ammonium transporter -0.51
    8 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) -0.51
    9 GFF1761 Putative hemolysin -0.51
    10 GFF1644 hypothetical protein -0.51
    11 GFF6382 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) -0.50
    12 GFF859 Lactoylglutathione lyase (EC 4.4.1.5) -0.50
    13 GFF3147 hypothetical protein -0.49
    14 GFF3755 Transcriptional regulator, GntR family -0.49
    15 GFF273 Transcriptional regulator, Xre family -0.49
    16 GFF1598 no description -0.49
    17 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) -0.49
    18 GFF7115 hypothetical protein -0.49
    19 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) -0.49
    20 GFF2179 hypothetical protein -0.49

    Or look for positive cofitness