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  • Negative cofitness for GFF1260 from Variovorax sp. SCN45

    no description

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5985 dicarboxylic acid transporter PcaT -0.56
    2 GFF3782 hypothetical protein -0.55
    3 GFF4702 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.55
    4 GFF5919 KEGG: type VI secretion system secreted protein Hcp -0.55
    5 GFF1792 Transcriptional regulator, IclR family -0.55
    6 GFF3696 mRNA 3-end processing factor -0.54
    7 GFF5831 Ketosteroid isomerase-related protein -0.54
    8 GFF3370 hypothetical protein -0.52
    9 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.52
    10 GFF3755 Transcriptional regulator, GntR family -0.51
    11 GFF3547 no description -0.51
    12 GFF6704 no description -0.51
    13 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) -0.51
    14 GFF141 Transcriptional regulator, AraC family -0.50
    15 GFF455 Uncharacterized UPF0721 integral membrane protein -0.50
    16 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) -0.50
    17 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) -0.50
    18 GFF4173 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase (EC 2.1.1.14) -0.50
    19 GFF2479 hypothetical protein -0.49
    20 GFF1485 Transcriptional regulator, AraC family -0.49

    Or look for positive cofitness