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  • Negative cofitness for PS417_06365 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma factor RpoS
    KEGG: RNA polymerase nonessential primary-like sigma factor

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_00305 cytochrome oxidase subunit I -0.70
    2 PS417_00335 cytochrome B561 -0.66
    3 PS417_14920 CoA-transferase -0.59
    4 PS417_00300 cytochrome B559 subunit alpha -0.55
    5 PS417_03310 carbonate dehydratase -0.53
    6 PS417_25835 hypothetical protein -0.52
    7 PS417_16500 arginyl-tRNA-protein transferase -0.52
    8 PS417_16005 ATPase -0.51
    9 PS417_14915 host specificity protein -0.50
    10 PS417_24655 hypothetical protein -0.50
    11 PS417_04340 ribosome hibernation promoting factor HPF -0.49
    12 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase -0.49
    13 PS417_23890 ATPase -0.48
    14 PS417_01710 histidine utilization repressor -0.48
    15 PS417_27535 chemotaxis protein CheY -0.48
    16 PS417_24835 hypothetical protein -0.47
    17 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase -0.47
    18 PS417_18390 LacI family transcriptional regulator -0.45
    19 PS417_25790 aminoglycoside phosphotransferase -0.44
    20 PS417_21420 aminodeoxychorismate lyase -0.44

    Or look for positive cofitness