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  • Negative cofitness for GFF1253 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3228 hypothetical protein -0.60
    2 GFF1951 no description -0.56
    3 GFF3566 Transcriptional regulator, LysR family -0.55
    4 GFF5839 no description -0.54
    5 GFF6083 hypothetical protein PA3071 -0.53
    6 GFF633 Urea ABC transporter, ATPase protein UrtD -0.53
    7 GFF5069 BUG/TctC family periplasmic protein -0.53
    8 GFF6008 Citrate synthase (si) (EC 2.3.3.1) -0.51
    9 GFF6202 Unknown substrate:proton symporter -0.50
    10 GFF5628 Transcriptional regulator Daci_1847, LysR family -0.50
    11 GFF17 hypothetical protein -0.50
    12 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative -0.50
    13 GFF7062 probable carboxylesterase -0.50
    14 GFF6555 no description -0.49
    15 GFF6502 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) -0.49
    16 GFF3538 Ferric iron ABC transporter, iron-binding protein -0.49
    17 GFF542 no description -0.49
    18 GFF3090 Colicin V production protein -0.49
    19 GFF7351 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) -0.48
    20 GFF544 Isoleucyl-tRNA synthetase (EC 6.1.1.5) -0.48

    Or look for positive cofitness