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  • Negative cofitness for PS417_06345 from Pseudomonas simiae WCS417

    pseudouridine synthase
    SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)
    KEGG: tRNA pseudouridine synthase D

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06785 NADH:flavin oxidoreductase -0.25
    2 PS417_26875 histidine kinase -0.23
    3 PS417_02680 hypothetical protein -0.21
    4 PS417_27385 amino acid ABC transporter substrate-binding protein -0.21
    5 PS417_27655 LysR family transcriptional regulator -0.20
    6 PS417_14620 hypothetical protein -0.20
    7 PS417_21135 Asp/Glu/hydantoin racemase -0.19
    8 PS417_05960 chemotaxis protein -0.19
    9 PS417_15710 nitrate reductase -0.19
    10 PS417_21370 allantoin permease -0.19
    11 PS417_04555 LuxR family transcriptional regulator -0.18
    12 PS417_19150 ABC transporter ATP-binding protein -0.18
    13 PS417_07630 hypothetical protein -0.18
    14 PS417_22585 membrane protein -0.17
    15 PS417_12630 monooxygenase -0.17
    16 PS417_16685 multidrug MFS transporter -0.17
    17 PS417_18180 dioxygenase -0.17
    18 PS417_18205 aldehyde dehydrogenase -0.17
    19 PS417_23005 XRE family transcriptional regulator -0.17
    20 PS417_11465 LysR family transcriptional regulator -0.17

    Or look for positive cofitness