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  • Negative cofitness for GFF1246 from Variovorax sp. SCN45

    FIG001341: Probable Fe(2+)-trafficking protein YggX
    SEED: FIG001341: Probable Fe(2+)-trafficking protein YggX

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6390 GtrA-like protein -0.70
    2 GFF2649 putative autotransporter protein -0.68
    3 GFF7373 CaiB/BaiF family protein -0.68
    4 GFF994 Cytoskeleton protein RodZ -0.67
    5 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) -0.67
    6 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) -0.66
    7 GFF2817 Probable proline-rich protein -0.66
    8 GFF2738 hypothetical protein -0.66
    9 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) -0.65
    10 GFF7375 Arginine:pyruvate transaminase -0.65
    11 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein -0.64
    12 GFF2504 Cell division protein ZapD -0.64
    13 GFF4397 hypothetical protein -0.63
    14 GFF3850 Periplasmic serine proteases (ClpP class) -0.63
    15 GFF6294 Cell division protein -0.63
    16 GFF2653 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) -0.63
    17 GFF4396 Mobile element protein -0.63
    18 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake -0.62
    19 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) -0.62
    20 GFF4656 TonB-dependent siderophore receptor -0.62

    Or look for positive cofitness