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  • Negative cofitness for PS417_06325 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family, in formaldehyde detoxification operon

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_07545 ABC transporter ATP-binding protein -0.38
    2 PS417_27250 glycine cleavage system protein H -0.34
    3 PS417_06135 glycerol-3-phosphate acyltransferase -0.33
    4 PS417_17785 4-amino-4-deoxy-L-arabinose transferase -0.31
    5 PS417_05090 ferric citrate outer membrane transporter (fecA) (from data) -0.30
    6 PS417_05705 pyocin R2, holin -0.28
    7 PS417_22480 ferritin -0.27
    8 PS417_28410 acyl-phosphate glycerol 3-phosphate acyltransferase -0.26
    9 PS417_12215 lytic transglycosylase -0.25
    10 PS417_17170 carbon-nitrogen hydrolase -0.25
    11 PS417_24210 dolichyl-phosphate-mannose-protein mannosyltransferase -0.25
    12 PS417_06550 cysteine synthase -0.24
    13 PS417_20700 cbb3-type cytochrome c oxidase subunit I -0.23
    14 PS417_23890 ATPase -0.22
    15 PS417_16515 Clp protease ClpS -0.21
    16 PS417_22050 ribonuclease BN -0.21
    17 PS417_06515 beta-agarase -0.21
    18 PS417_00865 hypothetical protein -0.20
    19 PS417_13685 HxlR family transcriptional regulator -0.20
    20 PS417_00605 peptide transporter -0.20

    Or look for positive cofitness