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  • Negative cofitness for GFF1238 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, OmpR family
    SEED: Two-component response regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6299 BUG/TctC family periplasmic protein -0.55
    2 GFF335 Cytosine deaminase (EC 3.5.4.1) -0.48
    3 GFF2521 FIG00931781: hypothetical protein -0.47
    4 GFF3357 hypothetical protein -0.46
    5 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) -0.46
    6 GFF6983 FIG140336: TPR domain protein -0.45
    7 GFF1817 5-hydroxyisourate hydrolase (EC 3.5.2.17) -0.45
    8 GFF3533 Two-component system sensor histidine kinase -0.44
    9 GFF4240 Integral membrane protein -0.43
    10 GFF1260 no description -0.43
    11 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) -0.43
    12 GFF6256 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37) -0.43
    13 GFF5736 Flagellar hook-associated protein FlgL -0.42
    14 GFF5056 Fumarylacetoacetase (EC 3.7.1.2) -0.42
    15 GFF4558 RNA polymerase ECF-type sigma factor -0.42
    16 GFF1601 no description -0.41
    17 GFF2790 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) -0.41
    18 GFF42 hypothetical protein -0.41
    19 GFF2257 RNA 3'-terminal phosphate cyclase (EC 6.5.1.4) -0.41
    20 GFF6903 Transcriptional regulator, LysR family -0.40

    Or look for positive cofitness