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  • Negative cofitness for GFF1208 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6152 hypothetical protein -0.58
    2 GFF6219 hypothetical protein -0.57
    3 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) -0.57
    4 GFF6243 Ku domain protein -0.54
    5 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) -0.54
    6 GFF6682 Efflux ABC transporter, permease protein -0.49
    7 GFF4655 SAM-dependent methyltransferase -0.49
    8 GFF2319 Arginine exporter protein ArgO -0.49
    9 GFF5112 Glutathione peroxidase (EC 1.11.1.9) @ Thioredoxin peroxidase (EC 1.11.1.15) -0.49
    10 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) -0.48
    11 GFF3561 Glycosyltransferases involved in cell wall biogenesis -0.48
    12 GFF2872 Cell division protein FtsL -0.48
    13 GFF4399 hypothetical protein -0.48
    14 GFF4181 hypothetical protein -0.47
    15 GFF2722 Transcriptional regulator, LysR family -0.47
    16 GFF6720 no description -0.46
    17 GFF164 DinG family ATP-dependent helicase CPE1197 -0.46
    18 GFF507 Hydrolase, alpha/beta fold family -0.46
    19 GFF5169 hypothetical protein -0.45
    20 GFF5847 putative membrane protein -0.45

    Or look for positive cofitness