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  • Negative cofitness for PS417_05990 from Pseudomonas simiae WCS417

    diguanylate cyclase
    SEED: diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
    KEGG: two-component system, chemotaxis family, response regulator WspR

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_07095 histidine kinase -0.36
    2 PS417_19630 LuxR family transcriptional regulator -0.30
    3 PS417_00295 hypothetical protein -0.30
    4 PS417_20660 hypothetical protein -0.29
    5 PS417_19615 chemotaxis protein CheW -0.28
    6 PS417_20670 glycosyl transferase family 2 -0.28
    7 PS417_04285 protease TldD -0.28
    8 PS417_19635 lipid kinase -0.28
    9 PS417_20655 group 1 glycosyl transferase -0.27
    10 PS417_20585 chemotaxis protein -0.27
    11 PS417_19625 histidine kinase -0.26
    12 PS417_02210 diguanylate cyclase -0.26
    13 PS417_20645 membrane protein -0.26
    14 PS417_20665 hypothetical protein -0.26
    15 PS417_03230 TetR family transcriptional regulator -0.26
    16 PS417_18705 succinate dehydrogenase -0.25
    17 PS417_22190 diguanylate cyclase -0.25
    18 PS417_03930 thymidine phosphorylase -0.25
    19 PS417_08195 hypothetical protein -0.25
    20 PS417_17240 trigger factor -0.24

    Or look for positive cofitness