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  • Negative cofitness for PS417_05980 from Pseudomonas simiae WCS417

    chemotaxis protein CheA
    SEED: Sensor histidine kinase/response regulator
    KEGG: two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_11430 EamA -0.35
    2 PS417_00595 chemotaxis protein -0.29
    3 PS417_24500 DEAD/DEAH box helicase -0.28
    4 PS417_26370 RNA helicase -0.28
    5 PS417_04290 hypothetical protein -0.28
    6 PS417_02575 membrane protein -0.27
    7 PS417_16005 ATPase -0.23
    8 PS417_15470 saccharopine dehydrogenase -0.23
    9 PS417_27510 disulfide bond formation protein B -0.23
    10 PS417_07095 histidine kinase -0.23
    11 PS417_09470 hypothetical protein -0.22
    12 PS417_02775 heat-shock protein -0.22
    13 PS417_04295 peptidase PmbA -0.22
    14 PS417_02890 cobalt-precorrin-6X reductase -0.22
    15 PS417_07635 transcription-repair coupling factor -0.22
    16 PS417_11435 asparagine synthase -0.22
    17 PS417_20035 adenosylcobinamide kinase -0.21
    18 PS417_20930 50S rRNA methyltransferase -0.21
    19 PS417_04285 protease TldD -0.21
    20 PS417_05255 hypothetical protein -0.21

    Or look for positive cofitness