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  • Negative cofitness for PS417_05930 from Pseudomonas simiae WCS417

    spermidine/putrescine ABC transporter permease
    SEED: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
    KEGG: putative spermidine/putrescine transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_24155 ATP-binding protein -0.33
    2 PS417_11900 conjugal transfer protein TraR -0.27
    3 PS417_15265 type VI secretion protein VasK -0.27
    4 PS417_07015 helicase -0.24
    5 PS417_09900 hypothetical protein -0.24
    6 PS417_23770 exodeoxyribonuclease V subunit alpha -0.23
    7 PS417_12025 DSBA oxidoreductase -0.23
    8 PS417_21040 sulfurylase -0.23
    9 PS417_20125 phosphoribosylglycinamide formyltransferase -0.23
    10 PS417_20985 porin -0.22
    11 PS417_12825 MFS transporter -0.22
    12 PS417_09890 hypothetical protein -0.22
    13 PS417_24175 hypothetical protein -0.21
    14 PS417_13765 histidine kinase -0.21
    15 PS417_03070 LuxR family transcriptional regulator -0.21
    16 PS417_26405 diguanylate cyclase -0.21
    17 PS417_24030 MFS transporter -0.20
    18 PS417_15260 protein phosphatase -0.20
    19 PS417_09975 hypothetical protein -0.20
    20 PS417_06385 DEAD/DEAH box helicase -0.20

    Or look for positive cofitness