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  • Negative cofitness for PS417_05925 from Pseudomonas simiae WCS417

    spermidine/putrescine ABC transporter permease
    SEED: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
    KEGG: putative spermidine/putrescine transport system permease protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_19255 short-chain dehydrogenase -0.26
    2 PS417_05760 phage tail protein -0.25
    3 PS417_15710 nitrate reductase -0.23
    4 PS417_10825 glycine/betaine ABC transporter substrate-binding protein -0.23
    5 PS417_20360 serine/threonine protein phosphatase -0.22
    6 PS417_15705 nitrate reductase -0.22
    7 PS417_15715 nitrate reductase -0.22
    8 PS417_15695 molybdenum cofactor biosynthesis protein A -0.21
    9 PS417_19235 GNAT family acetyltransferase -0.21
    10 PS417_26350 peptidase C69 -0.21
    11 PS417_08935 thioesterase -0.21
    12 PS417_07000 hypothetical protein -0.20
    13 PS417_15690 ribonucleoside-triphosphate reductase -0.20
    14 PS417_03025 penicillin-binding protein 1C -0.20
    15 PS417_15610 GDP-mannose pyrophosphatase -0.20
    16 PS417_25270 NrdR family transcriptional regulator -0.19
    17 PS417_28335 dihydroorotase -0.19
    18 PS417_05785 tail protein -0.19
    19 PS417_18860 transcriptional regulator -0.19
    20 PS417_21245 hypothetical protein -0.19

    Or look for positive cofitness