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  • Negative cofitness for PS417_05870 from Pseudomonas simiae WCS417

    RNA-binding protein S4
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase F

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_02650 FAD-dependent oxidoreductase -0.19
    2 PS417_11130 peptide ABC transporter substrate-binding protein -0.19
    3 PS417_27905 serine/threonine protein kinase -0.18
    4 PS417_20595 hypothetical protein -0.18
    5 PS417_08200 hypothetical protein -0.17
    6 PS417_19075 ABC transporter ATP-binding protein -0.17
    7 PS417_08180 glycosyl transferase -0.16
    8 PS417_25290 hypothetical protein -0.16
    9 PS417_02615 transglutaminase -0.16
    10 PS417_05900 TetR family transcriptional regulator -0.16
    11 PS417_27765 peptide ABC transporter substrate-binding protein -0.16
    12 PS417_01675 maltodextrin phosphorylase -0.16
    13 PS417_15720 nitrate reductase -0.16
    14 PS417_04020 glycine/betaine ABC transporter substrate-binding protein -0.15
    15 PS417_06190 sodium:proton antiporter -0.15
    16 PS417_17920 nitrilotriacetate monooxygenase -0.15
    17 PS417_13690 chemotaxis protein -0.15
    18 PS417_07830 transposase -0.15
    19 PS417_08190 membrane protein -0.15
    20 PS417_19150 ABC transporter ATP-binding protein -0.15

    Or look for positive cofitness