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  • Negative cofitness for PS417_00575 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_00305 cytochrome oxidase subunit I -0.33
    2 PS417_03310 carbonate dehydratase -0.32
    3 PS417_18425 sporulation protein -0.30
    4 PS417_27535 chemotaxis protein CheY -0.29
    5 PS417_00335 cytochrome B561 -0.27
    6 PS417_24655 hypothetical protein -0.27
    7 PS417_21420 aminodeoxychorismate lyase -0.27
    8 PS417_25835 hypothetical protein -0.25
    9 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase -0.25
    10 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase -0.25
    11 PS417_00315 MFS transporter -0.23
    12 PS417_23150 Cro/Cl family transcriptional regulator -0.23
    13 PS417_16755 ABC transporter permease -0.23
    14 PS417_14920 CoA-transferase -0.22
    15 PS417_14005 4-hydroxyphenylpyruvate dioxygenase -0.22
    16 PS417_05775 tail tape measure protein -0.22
    17 PS417_27080 penicillin amidase -0.21
    18 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase -0.21
    19 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) -0.21
    20 PS417_23890 ATPase -0.21

    Or look for positive cofitness