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  • Negative cofitness for GFF114 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
    KEGG: polar amino acid transport system permease protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5652 FIG00014764: hypothetical protein -0.58
    2 GFF6673 Membrane protein -0.55
    3 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.53
    4 GFF5542 no description -0.53
    5 GFF1321 Probable diguanylate cyclase YeaP -0.51
    6 GFF6163 hypothetical protein -0.49
    7 GFF7241 no description -0.49
    8 GFF476 InterPro IPR005134 COGs COG2862 -0.48
    9 GFF3718 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB (EC 3.5.1.110) -0.48
    10 GFF307 FIG143263: Glycosyl transferase -0.47
    11 GFF2075 BUG/TctC family periplasmic protein -0.47
    12 GFF4871 FIG00457034: hypothetical protein -0.47
    13 GFF2279 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.47
    14 GFF3733 no description -0.46
    15 GFF5644 Selenophosphate-dependent tRNA 2-selenouridine synthase -0.46
    16 GFF7386 no description -0.46
    17 GFF5832 MoaF protein precursor -0.46
    18 GFF6690 hypothetical protein -0.46
    19 GFF4333 Transcriptional regulator, LysR family -0.45
    20 GFF7031 hypothetical protein -0.45

    Or look for positive cofitness