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  • Negative cofitness for GFF1130 from Variovorax sp. SCN45

    Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
    SEED: putative desaturase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1799 Hydroxypyruvate isomerase (EC 5.3.1.22) -0.61
    2 GFF648 integral membrane sensor signal transduction histidine kinase -0.58
    3 GFF6911 Transcriptional regulator, LacI family -0.58
    4 GFF6467 Nucleoside-diphosphate-sugar epimerases -0.57
    5 GFF1494 BUG/TctC family periplasmic protein -0.57
    6 GFF3574 hypothetical protein -0.56
    7 GFF5256 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) -0.55
    8 GFF2039 Transcriptional regulator, AcrR family -0.55
    9 GFF261 no description -0.53
    10 GFF4673 hypothetical protein -0.53
    11 GFF5404 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) -0.53
    12 GFF486 FIG00582348: hypothetical protein -0.52
    13 GFF6616 UPF0380 proteins YafZ and homologs -0.51
    14 GFF1525 RNA polymerase ECF-type sigma factor -0.51
    15 GFF2417 putative amidase -0.51
    16 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) -0.51
    17 GFF708 Oxidoreductase, GMC family -0.51
    18 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO -0.50
    19 GFF12 Two-component system sensor histidine kinase -0.50
    20 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) -0.50

    Or look for positive cofitness