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  • Negative cofitness for GFF1112 from Variovorax sp. SCN45

    Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    SEED: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4181 hypothetical protein -0.57
    2 GFF6390 GtrA-like protein -0.52
    3 GFF1460 Enoyl-CoA hydratase/isomerase -0.51
    4 GFF4818 Hydroxymethylpyrimidine ABC transporter, substrate-binding component -0.50
    5 GFF5969 Transcriptional regulator, GntR family -0.50
    6 GFF37 Similar to Agmatine deiminase -0.50
    7 GFF5217 Ferric iron ABC transporter, iron-binding protein -0.50
    8 GFF1443 Excinuclease ABC subunit A paralog of unknown function -0.49
    9 GFF5917 T6SS component TssB (ImpB/VipA) -0.49
    10 GFF6262 Transcriptional regulator PhnF -0.48
    11 GFF4453 Esterase YqiA -0.48
    12 GFF1882 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit (EC 1.2.7.-) -0.48
    13 GFF3335 no description -0.48
    14 GFF7076 no description -0.47
    15 GFF5518 Nudix hydrolase family protein KPN_02621 -0.47
    16 GFF7129 Mobile element protein -0.46
    17 GFF5028 hypothetical protein -0.46
    18 GFF455 Uncharacterized UPF0721 integral membrane protein -0.46
    19 GFF418 Endonuclease III (EC 4.2.99.18) -0.46
    20 GFF3962 Opine dehydrogenase (EC 1.5.1.28) -0.45

    Or look for positive cofitness