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  • Negative cofitness for GFF11 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, OmpR family
    SEED: DNA-binding heavy metal response regulator

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6685 LSU ribosomal protein L36p @ LSU ribosomal protein L36p, zinc-independent -0.56
    2 GFF4245 Cytochrome c peroxidase (EC 1.11.1.5) -0.52
    3 GFF1847 Nucleoside ABC transporter, substrate-binding protein -0.52
    4 GFF4937 no description -0.50
    5 GFF4846 Conjugative transfer protein TrbE -0.50
    6 GFF4598 Efflux ABC transporter, permease/ATP-binding protein mlr7818 -0.50
    7 GFF677 FIG00931906: hypothetical protein -0.49
    8 GFF2457 no description -0.49
    9 GFF434 OsmC/Ohr family protein -0.48
    10 GFF2883 CaiB/BaiF family protein -0.48
    11 GFF5035 Opine oxidase subunit A -0.48
    12 GFF3238 no description -0.47
    13 GFF5239 hypothetical protein -0.47
    14 GFF4974 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) -0.47
    15 GFF218 hypothetical protein -0.47
    16 GFF6034 Replication-associated recombination protein RarA -0.47
    17 GFF5496 BUG/TctC family periplasmic protein -0.46
    18 GFF549 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) -0.46
    19 GFF1720 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 / Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 -0.46
    20 GFF4237 no description -0.46

    Or look for positive cofitness