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  • Negative cofitness for GFF1099 from Variovorax sp. SCN45

    Na+-driven multidrug efflux pump
    SEED: Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog
    KEGG: multidrug resistance protein, MATE family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2859 Excinuclease ABC subunit C -0.58
    2 GFF4043 Copper sensory histidine kinase CusS -0.58
    3 GFF253 Transcriptional regulator, LysR family -0.52
    4 GFF3094 17 kDa surface antigen -0.52
    5 GFF6772 L-arabonate dehydratase (EC 4.2.1.25) -0.50
    6 GFF2631 Transcriptional regulator, ArsR family -0.48
    7 GFF4847 Conjugative transfer protein TrbD -0.48
    8 GFF2046 no description -0.48
    9 GFF1140 Domain of unknown function / Efflux ABC transporter, permease protein -0.47
    10 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) -0.47
    11 GFF4733 Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) -0.47
    12 GFF769 Conserved TM helix -0.46
    13 GFF3647 Cytochrome b -0.46
    14 GFF317 Acyl carrier protein -0.46
    15 GFF6378 Nicotinamidase (EC 3.5.1.19) -0.46
    16 GFF6177 Putative transmembrane protein -0.46
    17 GFF417 Aspartate aminotransferase (AspB-4) (EC 2.6.1.1) -0.46
    18 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) -0.46
    19 GFF4208 BUG/TctC family periplasmic protein -0.46
    20 GFF646 no description -0.46

    Or look for positive cofitness