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  • Negative cofitness for PS417_05540 from Pseudomonas simiae WCS417

    histidine kinase
    SEED: Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3)
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_05090 ferric citrate outer membrane transporter (fecA) (from data) -0.51
    2 PS417_13375 LysR family transcriptional regulator -0.27
    3 PS417_09325 peptidase S41 -0.18
    4 PS417_18855 peptidase -0.17
    5 PS417_03160 metal ABC transporter ATPase -0.16
    6 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase -0.16
    7 PS417_14200 hypothetical protein -0.16
    8 PS417_07755 hypothetical protein -0.16
    9 PS417_22670 AraC family transcriptional regulator -0.15
    10 PS417_05100 RNA polymerase sigma factor -0.15
    11 PS417_08070 nickel ABC transporter permease -0.15
    12 PS417_26820 peptidase M16 -0.15
    13 PS417_05525 Fis family transcriptional regulator -0.15
    14 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein -0.14
    15 PS417_05520 histidine kinase -0.14
    16 PS417_07160 glycine cleavage system protein R -0.14
    17 PS417_26875 histidine kinase -0.14
    18 PS417_25335 cardiolipin synthase 2 -0.14
    19 PS417_08640 sodium:proton antiporter -0.13
    20 PS417_10785 hypothetical protein -0.13

    Or look for positive cofitness