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  • Negative cofitness for GFF1069 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Putative major fimbrial subunit
    SEED: Putative major fimbrial subunit

    Computing cofitness values with 79 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4235 Putative inner membrane protein -0.48
    2 GFF3498 Excinuclease cho (excinuclease ABC alternative C subunit) -0.45
    3 GFF258 Uridine phosphorylase (EC 2.4.2.3) -0.45
    4 GFF2264 L-rhamnose isomerase (EC 5.3.1.14) -0.44
    5 GFF3540 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.44
    6 GFF59 Sugar diacid utilization regulator SdaR -0.42
    7 GFF219 Citrate lyase alpha chain (EC 4.1.3.6) -0.41
    8 GFF411 L-lactate permease -0.39
    9 GFF627 Type IV pilus biogenesis protein PilP -0.39
    10 GFF2749 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) -0.38
    11 GFF3995 metal-dependent phosphohydrolase -0.38
    12 GFF4468 Putative periplasmic protein -0.37
    13 GFF3945 Propanediol dehydratase large subunit (EC 4.2.1.28) -0.37
    14 GFF2464 PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69) -0.36
    15 GFF179 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) -0.36
    16 GFF286 Mediator of hyperadherence YidE -0.36
    17 GFF2263 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) -0.36
    18 GFF132 Type IV fimbrial assembly, ATPase PilB -0.36
    19 GFF3741 FIG01047264: hypothetical protein -0.36
    20 GFF1235 27.5 kDa virulence protein -0.35

    Or look for positive cofitness