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  • Negative cofitness for GFF105 from Sphingobium sp. HT1-2

    ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    KEGG: DNA ligase (ATP)

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF644 hypothetical protein -0.73
    2 GFF4865 hypothetical protein -0.71
    3 GFF5409 hypothetical protein -0.65
    4 GFF2782 Two-component transcriptional response regulator, LuxR family -0.63
    5 GFF3711 Flagellar hook protein FlgE -0.62
    6 GFF796 Cobalt/zinc/cadmium resistance protein CzcD -0.62
    7 GFF4452 Copper resistance protein B -0.62
    8 GFF2531 FIG004851: hypothetical protein -0.62
    9 GFF1286 Zinc uptake regulation protein Zur -0.62
    10 GFF4455 Alcohol dehydrogenase (EC 1.1.1.1) -0.61
    11 GFF281 hypothetical protein -0.61
    12 GFF4694 hypothetical protein -0.60
    13 GFF1560 Transcriptional regulator, LysR family -0.59
    14 GFF4621 hypothetical protein -0.59
    15 GFF1756 hypothetical protein -0.58
    16 GFF1747 hypothetical protein -0.58
    17 GFF996 Tol-Pal system peptidoglycan-associated lipoprotein PAL -0.58
    18 GFF3272 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) -0.58
    19 GFF2555 hypothetical protein -0.58
    20 GFF604 Protein PhnA -0.57

    Or look for positive cofitness